Conditions | Yield |
---|---|
With tris(2-carboxyethyl)phosphine; glycosyltransferase GtfD; bovine serum albumin In glycerol at 37℃; for 1.5h; Enzymatic reaction; | 87% |
vancomycin
Conditions | Yield |
---|---|
With ammonium bicarbonate; palladium on activated charcoal In acetic acid at 23℃; for 4h; Hydrogenolysis; | 81% |
With ammonium formate; acetic acid; 10percent Pd/C In methanol at 23℃; for 4h; | 81% |
N,N'-dialloc-tri-O-allyl vancomycin allyl ester
vancomycin
Conditions | Yield |
---|---|
With bis(triphenylphosphine)palladium(II) dichloride; tri-n-butyl-tin hydride In acetic acid; N,N-dimethyl-formamide for 0.166667h; Ambient temperature; | 78% |
A
(R)-2-[(R)-2-((S)-2,6-Bis-acetylamino-hexanoylamino)-propionylamino]-propionic acid
B
vancomycin
Conditions | Yield |
---|---|
With sodium citrate at 25℃; Equilibrium constant; pH 5.1; |
A
vancomycin
Conditions | Yield |
---|---|
With sodium citrate at 25℃; Equilibrium constant; pH 5.1; |
Conditions | Yield |
---|---|
With Tris-HCl buffer; N-methyltransferase at 25℃; for 24h; pH=7.5; Methylation; Enzymatic reaction; |
vancomycin
Conditions | Yield |
---|---|
With lithium hydroxide; water In tetrahydrofuran at 0℃; for 0.333333h; Hydrolysis; |
desvancosaminyl vancomycin
thymidine 5'-(3-amino-2,3,6-trideoxy-3C-methyl-β-L-lyxo-hexopyranosyl diphosphate)
vancomycin
Conditions | Yield |
---|---|
With glycosyltransferase GtfD Enzyme kinetics; Further Variations:; Reagents; |
Conditions | Yield |
---|---|
With sodium hydrogencarbonate In 1,4-dioxane; water | 100% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 100% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 100% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 100% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 100% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 97% |
Stage #1: vancomycin With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In N,N-dimethyl-formamide for 0.0833333h; Stage #2: 1-amino-pent-4-yne With 4-methyl-morpholine In N,N-dimethyl-formamide at 20℃; pH=8; |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 96% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 95% |
Stage #1: vancomycin With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In N,N-dimethyl-formamide for 0.0833333h; Stage #2: but-3-yn-1-amine With 4-methyl-morpholine In N,N-dimethyl-formamide at 20℃; pH=8; |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 93% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 93% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 92% |
With 1-hydroxy-pyrrolidine-2,5-dione; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 20℃; for 24h; Inert atmosphere; | |
Stage #1: vancomycin With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In N,N-dimethyl-formamide for 0.0833333h; Stage #2: Propargylamine With 4-methyl-morpholine In N,N-dimethyl-formamide at 20℃; pH=8; |
vancomycin
vancomycin aglycon
Conditions | Yield |
---|---|
With hydrogen fluoride In methoxybenzene at 25℃; for 2h; | 91% |
With hydrogenchloride; water Hydrolysis; Heating; | 81% |
With trifluoroacetic acid at 50℃; for 3h; | |
With hydrogenchloride at 70℃; for 0.0833333h; |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 23℃; | 88% |
Conditions | Yield |
---|---|
With triethylamine In N,N-dimethyl-formamide Condensation; | 81% |
Conditions | Yield |
---|---|
Stage #1: CH4*C23H35N3O4; vancomycin With N-ethyl-N,N-diisopropylamine In methanol; N,N-dimethyl-formamide at 75℃; for 2h; Stage #2: With sodium cyanoborohydride In methanol; N,N-dimethyl-formamide at 75℃; for 48h; | 81% |
Conditions | Yield |
---|---|
With triethylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 20℃; Inert atmosphere; | 78% |
vancomycin
4'-chlorobiphenyl-4-carbaldehyde
Conditions | Yield |
---|---|
Stage #1: vancomycin; 4'-chlorobiphenyl-4-carbaldehyde With N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 25 - 70℃; for 2h; Stage #2: With sodium cyanoborohydride In tetrahydrofuran; N,N-dimethyl-formamide at 70℃; for 5h; | 74% |
Stage #1: vancomycin; 4'-chlorobiphenyl-4-carbaldehyde With N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 25 - 70℃; for 2h; Stage #2: With sodium cyanoborohydride In tetrahydrofuran; N,N-dimethyl-formamide at 70℃; for 5h; | 61% |
Stage #1: vancomycin; 4'-chlorobiphenyl-4-carbaldehyde With N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 50℃; for 4h; Stage #2: With sodium cyanoborohydride; trifluoroacetic acid In methanol; N,N-dimethyl-formamide at 20 - 25℃; | 60 mg |
Stage #1: vancomycin; 4'-chlorobiphenyl-4-carbaldehyde With N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 70℃; for 2h; Stage #2: With sodium cyanoborohydride In tetrahydrofuran; N,N-dimethyl-formamide at 70℃; for 5h; | 1.64 g |
vancomycin
3-[9-({{4-[(2,5-dioxo-1-pyrrolidinyl)oxy]-4-oxobutyl}[(4-methylphenyl)sulfonyl]amino}carbonyl)-10-acridiniumyl]-1-propanesulfonate
Conditions | Yield |
---|---|
With triethylamine In N,N-dimethyl-formamide Condensation; | 70% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 20℃; | 70% |
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 20℃; for 12h; |
vancomycin
trifluoroacetic acid
N(1),N(1)-bis((pyridin-2-yl)methyl)hexane-1,6-diamine
Conditions | Yield |
---|---|
Stage #1: vancomycin; N(1),N(1)-bis((pyridin-2-yl)methyl)hexane-1,6-diamine With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 20℃; Stage #2: trifluoroacetic acid In water; acetonitrile | 70% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 0 - 20℃; | 70% |
vancomycin
Conditions | Yield |
---|---|
With sodium tetrahydroborate; water In ethanol for 24h; Ambient temperature; | 68% |
Conditions | Yield |
---|---|
With 4-methyl-morpholine; O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate In dimethyl sulfoxide; N,N-dimethyl-formamide | 68% |
With 4-methyl-morpholine; O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate In dimethyl sulfoxide; N,N-dimethyl-formamide at 25℃; for 0.0833333h; | 68% |
Conditions | Yield |
---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide; N,N-dimethyl-formamide at 20℃; for 4h; | 67% |
vancomycin
Conditions | Yield |
---|---|
With fluorosulfonyl azide; potassium hydrogencarbonate In tert-butyl methyl ether; water; N,N-dimethyl-formamide at 20℃; for 1.5h; | 67% |
vancomycin
desvancosaminyl vancomycin
Conditions | Yield |
---|---|
With water; trifluoroacetic acid at 10℃; for 2h; | 65% |
With water; trifluoroacetic acid at 10℃; for 2h; Product distribution / selectivity; | 45% |
With water; trifluoroacetic acid at 10℃; for 2h; | 45% |
Conditions | Yield |
---|---|
Stage #1: t-butyldimethylsiyl triflate; vancomycin With 2,6-dimethylpyridine In dichloromethane; N,N-dimethyl-formamide at 0 - 25℃; for 18h; Etherification; Stage #2: With sodium hydrogencarbonate In dichloromethane; N,N-dimethyl-formamide at 25℃; for 60h; Hydrolysis; | 65% |
With 2,6-dimethylpyridine In dichloromethane; N,N-dimethyl-formamide at 23℃; for 8h; Substitution; | |
With 2,6-dimethylpyridine In dichloromethane; N,N-dimethyl-formamide at 23℃; for 8h; sonication; |
Vancomycin (CAS NO.1404-90-6) was first isolated by EC Kornfeld (working at Eli Lilly) from a soil sample collected from the interior jungles of Borneo by a missionary. The organism that produced it was eventually named Amycolatopsis orientalis.
The compound was initially labelled compound 05865, but was eventually given the generic name, vancomycin (derived from the word "vanquished").In 1958 ,The rapid development of penicillin-resistance by staphylococci led to the compound being fast-tracked for approval by the FDA . Eli Lilly first marketed vancomycin hydrochloride under the trade name Vancocin.
The Vancomycin, with the CAS registry number 1404-90-6, has the systematic name of (1S,2R,18R,19R,22S,25R,28R,40S)-48-{[(2S,3R,4S,5S,6R)-3-{[(2S,4S,5S,6S)-4-amino-5-hydroxy-4,6-dimethyltetrahydro-2H-pyran-2-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-22-(2-a mino-2-oxoethyl)-5,15-dichloro-2,18,32,35,37-pentahydroxy-19-{[(2R)-4-methyl-2-(methylamino)pentanoyl]amino}-20,23,26,42,44-pentaoxo-7,13-dioxa-21,24,27,41,43-pentaazaoctacyclo[26.14.2.2~3,6~.2~14,17~ .1~8,12~.1~29,33~.0~10,25~.0~34,39~]pentaconta-3,5,8(48),9,11,14,16,29(45),30,32,34,36,38,46,49-pentadecaene-40-carboxylic acid (non-preferred name).
The physical properties of this chemical are as below: (1)# of Rule of 5 Violations: 3; (2)ACD/BCF (pH 5.5): 1; (3)ACD/BCF (pH 7.4): 1; (4)ACD/KOC (pH 5.5): 1; (5)ACD/KOC (pH 7.4): 1; (6)#H bond acceptors: 33; (7)#H bond donors: 21; (8)#Freely Rotating Bonds: 23; (9)Polar Surface Area: 530.49; (10)Index of Refraction: 1.735; (11)Molar Refractivity: 350.837 cm3; (12)Molar Volume: 874.685 cm3; (13)Polarizability: 139.083×10-24 cm3; (14)Surface Tension: 105.146 dyne/cm; (15)Density: 1.657 g/cm3; (16)Exact Mass: 1447.4302; (17)MonoIsotopic Mass: 1447.4302; (18)Topological Polar Surface Area: 531; (19)Heavy Atom Count: 101; (20)Complexity: 2960.
In addition, you could convert the following datas into the molecular structure:
(1)Canonical SMILES: CC1C(C(CC(O1)OC2C(C(C(OC2OC3=C4C=C5C=C3OC6=C(C=C(C=C6)C(C(C(=O)NC(C(=O)NC5C(=O)NC7C8=CC(=C(C=C8)O)C9=C(C=C(C=C9C(NC(=O)C(C(C1=CC(=C(O4)C=C1)Cl)O)NC7=O)C(=O)O)O) O)CC(=O)N)NC(=O)C(CC(C)C)NC)O)Cl)CO)O)O)(C)N)O
(2)Isomeric SMILES: C[C@H]1[C@H]([C@@](C[C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2OC3=C4C=C5C=C3OC6=C(C=C(C=C6)[C@H]([C@H](C(=O)N[C@H](C(=O)N[C@H]5C(=O)N[C@@H]7C8=CC(=C(C=C8)O)C9=C(C=C(C=C9[C@H](NC(=O)[C@H]([C@@H](C1=CC(=C(O4)C=C1)Cl)O)NC7=O)(=O)O)O)O)CC(=O)N)NC(=O)[C@@H](CC(C)C)NC)O)Cl)CO)O)O)(C)N)O
(3)InChI: InChI=1S/C66H75Cl2N9O24/c1-23(2)12-34(71-5)58(88)76-49-51(83)26-7-10-38(32(67)14- 26)97-40-16-28-17-41(55(40)101-65-56(54(86)53(85)42(22-78)99-65)100-44-21-66(4,70)57(87)24(3)96-44)98-39-11-8-27(15-33(39)68)52(84)50-63(93)75-48(64(94)95)31-18-29(79)19-37(81)45(31)30-13-25(6-9-36(30)80)46(60(90)77-50)74-61(91)47(28)73-59(89)35(20-43(69)82)72-62(49)92/h6-11,13-19,23-24,34-35,42,44,46-54,56-57,65,71,78-81,83-87H,12,20-22,70H2,1-5H3,(H2,69,82)(H,72,92)(H,73,89)(H,74,91)(H,75,93)(H,76,88)(H,77,90)(H,94,95)/t24-,34+,35-,42+,44-,46+,47+,48-,49+,50-,51+,52+,53+,54-,56+,57+,65-,66-/m0/s1
(4)InChIKey: MYPYJXKWCTUITO-LYRMYLQWSA-N
Below are the toxicity information of this chemical:
Organism | Test Type | Route | Reported Dose (Normalized Dose) | Effect | Source |
---|---|---|---|---|---|
infant | TDLo | intravenous | 30mg/kg/20M-C (30mg/kg) | LUNGS, THORAX, OR RESPIRATION: CYANOSIS CARDIAC: OTHER CHANGES | Archives of Disease in Childhood. Vol. 73, Pg. F123, 1995. |
infant | TDLo | intravenous | 119mg/kg (119mg/kg) | CARDIAC: PULSE RATE INCREASE WITHOUT FALL IN BP VASCULAR: BP LOWERING NOT CHARACTERIZED IN AUTONOMIC SECTION LUNGS, THORAX, OR RESPIRATION: CYANOSIS | Journal of Toxicology, Clinical Toxicology. Vol. 34, Pg. 83, 1996. |
infant | TDLo | intravenous | 295mg/kg/3D-I (295mg/kg) | KIDNEY, URETER, AND BLADDER: INTERSTITIAL NEPHRITIS | Journal of Toxicology, Clinical Toxicology. Vol. 30, Pg. 285, 1992. |
man | TDLo | intravenous | 15mg/kg/2H-C (15mg/kg) | VASCULAR: BP ELEVATION NOT CHARACTERIZED IN AUTONOMIC SECTION LUNGS, THORAX, OR RESPIRATION: DYSPNEA | Annals of Pharmacotherpy. Vol. 33, Pg. 1043, 1999. |
mouse | LD50 | intraperitoneal | 1734mg/kg (1734mg/kg) | "Index of Antibiotics from Actinomycetes," Umezawa, H. et al., eds., Tokyo, Univ. of Tokyo Press, 1967Vol. -, Pg. 675, 1967. | |
mouse | LD50 | intravenous | 430mg/kg (430mg/kg) | Journal of Antibiotics. Vol. 43, Pg. 913, 1990. | |
mouse | LD50 | subcutaneous | 5gm/kg (5000mg/kg) | "CRC Handbook of Antibiotic Compounds," Vols.1- , Berdy, J., Boca Raton, FL, CRC Press, 1980Vol. 1, Pg. 315, 1980. | |
women | TDLo | intravenous | 15mg/kg/90M-C (15mg/kg) | SKIN AND APPENDAGES (SKIN): "DERMATITIS, ALLERGIC: AFTER SYSTEMIC EXPOSURE" | New England Journal of Medicine. Vol. 313, Pg. 756, 1985. |
women | TDLo | intravenous | 170mg/kg/19D- (170mg/kg) | BLOOD: AGRANULOCYTOSIS | Canadian Medical Association Journal. Vol. 132, Pg. 39, 1985. |
women | TDLo | multiple routes | 30mg/kg/2D-I (30mg/kg) | SKIN AND APPENDAGES (SKIN): "DERMATITIS, OTHER: AFTER SYSTEMIC EXPOSURE" | Annals of Internal Medicine. Vol. 115, Pg. 410, 1991. |
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