Conditions | Yield |
---|---|
With iodine; silver nitrate In methanol at 40℃; for 3h; | 100% |
With iodine; silver nitrate In methanol at 40℃; for 3h; | 100% |
With sodium azide; Iodine monochloride In acetonitrile at 25℃; for 24h; Product distribution; Mechanism; other uracil nucleosides; other halogenation agents; var. temp. and time; | 96% |
Conditions | Yield |
---|---|
With sodium methylate In methanol for 1h; Ambient temperature; | 90% |
With methanol; sodium methylate at 20℃; for 1h; |
5-trimethylstannyl-2'-deoxyuridine
5-Iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With sodium hydroxide; dihydrogen peroxide; acetic acid; sodium iodide In chloroform for 0.00416667h; Irradiation; |
5-Iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With ammonia In methanol at 30℃; for 16h; |
Conditions | Yield |
---|---|
at 37℃; for 6h; alginate gel-entrapped cells of auxotrophic thymine-dependent strain of E. coli, ammonium acetate buffer pH 5.8; |
Conditions | Yield |
---|---|
With thymidine phosphorylase from Escherichia coli In phosphate buffer at 35℃; for 2h; pH=7.0; Title compound not separated from byproducts; | A 88 % Chromat. B n/a |
3',5'-di-O-acetyl-2'-deoxyuridine
5-Iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
Multi-step reaction with 2 steps 1: 93 percent / LiI, ceric ammonium nitrate (CAN) / acetonitrile / 1 h / 80 °C / other conditions and reagents investigated 2: 90 percent / 0.1 M NaOMe / methanol / 1 h / Ambient temperature View Scheme |
C5-chloromercuri-2'-deoxyuridine
1,3,4,6-tetrachloro-3α,6α-diphenyl glycoluril
5-Iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With sodium iodide In water |
Conditions | Yield |
---|---|
With thymidine phosphorylase from Escherichia coli (E.C. 2.4.2.4) immobilized on Sepabeads EC-EP In aq. phosphate buffer at 20℃; for 3h; pH=7.5; Reagent/catalyst; Enzymatic reaction; |
3',5'-di-O-acetyl-2'-deoxyuridine
A
5-Iodo-2'-deoxyuridine
E
2'-deoxy-4-thiouridine
Conditions | Yield |
---|---|
Multi-step reaction with 4 steps 1: ammonium cerium (IV) nitrate; iodine / acetonitrile / 1 h / 80 °C 2: tetraphosphorus decasulfide / 1,4-dioxane / Reflux 3: sodium hydride / methanol / 0.17 h / 0 - 20 °C 4: aq. phosphate buffer; tert-butyl alcohol / Radiolysis View Scheme |
3',5'-O-diacetyl-5-iodo-2'-deoxyuridine
A
5-Iodo-2'-deoxyuridine
E
2'-deoxy-4-thiouridine
Conditions | Yield |
---|---|
Multi-step reaction with 3 steps 1: tetraphosphorus decasulfide / 1,4-dioxane / Reflux 2: sodium hydride / methanol / 0.17 h / 0 - 20 °C 3: aq. phosphate buffer; tert-butyl alcohol / Radiolysis View Scheme |
5-iodo-4-thio-2'-deoxyuridine
A
5-Iodo-2'-deoxyuridine
E
2'-deoxy-4-thiouridine
Conditions | Yield |
---|---|
In aq. phosphate buffer; tert-butyl alcohol Radiolysis; |
Conditions | Yield |
---|---|
Multi-step reaction with 5 steps 1: pyridine / 24 h / 20 °C 2: ammonium cerium (IV) nitrate; iodine / acetonitrile / 1 h / 80 °C 3: tetraphosphorus decasulfide / 1,4-dioxane / Reflux 4: sodium hydride / methanol / 0.17 h / 0 - 20 °C 5: aq. phosphate buffer; tert-butyl alcohol / Radiolysis View Scheme |
Conditions | Yield |
---|---|
With recobinant purine nucleoside phosphorylase from Escherichia coli In aq. phosphate buffer pH=6.8; Heating; Enzymatic reaction; |
Conditions | Yield |
---|---|
With E-pyrimidine nucleoside phosphorylase-0002 In aq. buffer at 50℃; for 2h; pH=9; Equilibrium constant; Enzymatic reaction; |
5-Iodo-2'-deoxyuridine
acrylic acid methyl ester
methyl (E)-3-(1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)acrylate
Conditions | Yield |
---|---|
With palladium diacetate; triethylamine; triphenylphosphine In 1,4-dioxane for 14h; Heating; | 100% |
Stage #1: 5-Iodo-2'-deoxyuridine With C26H32N8O6P2PdS2 In acetonitrile at 80℃; for 0.0833333h; Heck Reaction; Inert atmosphere; Stage #2: acrylic acid methyl ester With triethylamine In acetonitrile at 80℃; for 8h; Heck Reaction; Inert atmosphere; | 92% |
With palladium diacetate; triethylamine; triphenylphosphine In N,N-dimethyl-formamide at 100℃; for 1h; | 87% |
9-ethynyl-closo-1,7-dodecaborane
5-Iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; tetrakis(triphenylphosphine) palladium(0); triethylamine In N,N-dimethyl-formamide at 80℃; Sonogashira Cross-Coupling; Inert atmosphere; | 100% |
5-Iodo-2'-deoxyuridine
tert-butyldimethylsilyl chloride
2'-deoxy-3',5'-bis(O-tert-butyldimethylsilyl)-5-iodouridine
Conditions | Yield |
---|---|
With 1H-imidazole In pyridine for 33h; | 99% |
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; for 3h; | 99.8% |
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; for 60h; | 99% |
4,4'-dimethoxytrityl chloride
5-Iodo-2'-deoxyuridine
2'-deoxy-5'-O-(4,4'-dimethoxytrityl)-5-iodouridine
Conditions | Yield |
---|---|
With pyridine Ambient temperature; | 99% |
With pyridine; triethylamine at 20℃; for 1h; | 98% |
With pyridine In triethylamine at 20℃; for 5h; | 96% |
5-Iodo-2'-deoxyuridine
acetic anhydride
3',5'-O-diacetyl-5-iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With pyridine at 20℃; for 16.5h; | 99% |
With pyridine at 20℃; | 98% |
With pyridine at 25℃; for 20h; | 97% |
3,3-bis-(trifluoromethyl)-4,4,4-trifluoro-1-butyne
5-Iodo-2'-deoxyuridine
5-(4,4,4-trifluoro-3,3-bis(trifluoromethyl)but-1-ynyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; tetrakis(triphenylphosphine) palladium(0); N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 22℃; for 96h; Sonogashira coupling; Inert atmosphere; | 98% |
Conditions | Yield |
---|---|
With 3,3′,3″-phosphinetriyltribenzenesulfonate; palladium diacetate; triethylamine In water; acetonitrile at 80℃; for 1.5h; Solvent; Temperature; Reagent/catalyst; Inert atmosphere; | 98% |
With tri(3-sulfonatophenyl)phosphine trisodium salt; palladium diacetate; triethylamine In water; acetonitrile at 80℃; Heck reaction; Inert atmosphere; | 74% |
Conditions | Yield |
---|---|
With tris-(dibenzylideneacetone)dipalladium(0); triethylamine; triphenylphosphine In N,N-dimethyl-formamide at 70℃; | 98% |
1,3-Dichloro-1,1,3,3-tetraisopropyldisiloxane
5-Iodo-2'-deoxyuridine
5-iodo-3',5'-O-[(tetraisopropyl)disiloxane-1,3-diyl]-2'-deoxyuridine
Conditions | Yield |
---|---|
With 1H-imidazole In N,N-dimethyl-formamide for 12h; | 97% |
With pyridine at 20℃; | 97% |
With pyridine at 20℃; | 84% |
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; for 3h; silylation; |
5-Iodo-2'-deoxyuridine
phenylboronic acid
1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-5-phenylpyrimidine-2,4(1H,3H)-dione
Conditions | Yield |
---|---|
With palladium diacetate; sodium carbonate; triphenylphosphine In water; acetonitrile at 70 - 80℃; for 4h; Suzuki-Miyaura Coupling; Inert atmosphere; | 97% |
With palladium diacetate; sodium carbonate; triphenylphosphine In water; acetonitrile at 70 - 80℃; for 4h; Suzuki-Miyaura Coupling; Inert atmosphere; | 97% |
With C30H24Cl2N2O10Pd2S2(2-)*2Na(1+); triethylamine In water at 60℃; for 3h; Suzuki-Miyaura Coupling; Inert atmosphere; Schlenk technique; | 93% |
2-ethynylpyridine
5-Iodo-2'-deoxyuridine
5-(2-pyridylethynyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; tetrakis(triphenylphosphine) palladium(0); N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 20℃; Inert atmosphere; | 97% |
Conditions | Yield |
---|---|
With tributyl-amine; palladium diacetate In N,N-dimethyl-formamide at 100℃; for 0.333333h; Heck reaction; Microwave irradiation; | 97% |
With tributyl-amine; palladium diacetate In 1,4-dioxane; N,N-dimethyl-formamide at 100℃; for 0.333333h; Microwave irradiation; | 97% |
5-Iodo-2'-deoxyuridine
5-(benzofuran-2-yl)-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidine-2,4(1H,3H)-dione
Conditions | Yield |
---|---|
With bis-triphenylphosphine-palladium(II) chloride In 1,4-dioxane at 90℃; Stille Cross Coupling; | 97% |
5-Iodo-2'-deoxyuridine
but-1-yn-4-yl thiobenzoate
5-(4-benzoylthio-1-butynyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In N,N-dimethyl-formamide at 22 - 24℃; | 96% |
5-Iodo-2'-deoxyuridine
acetyl chloride
3',5'-O-diacetyl-5-iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With acetic anhydride; acetic acid 1.) 0 deg C, 1 h, 2.) RT, 24 h; | 95% |
Conditions | Yield |
---|---|
With tetrabutyl ammonium fluoride In tetrahydrofuran at 20℃; for 0.166667h; | 95% |
5-Iodo-2'-deoxyuridine
3-methyl-N-(prop-2-yn-1-yl)butanamide
Conditions | Yield |
---|---|
With copper(l) iodide; tetrakis(triphenylphosphine) palladium(0); triethylamine In N,N-dimethyl-formamide at 20℃; for 4h; | 95% |
5-Iodo-2'-deoxyuridine
diphenylphosphane
5-diphenylphosphine-2'-deoxyuridine
Conditions | Yield |
---|---|
With triethylamine; palladium diacetate In N,N-dimethyl-formamide at 60℃; for 0.5h; | 95% |
3-methoxyphenylboronic acid
5-Iodo-2'-deoxyuridine
5-(3-methoxyphenyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With tetrakis(triphenylphosphine) palladium(0); cesium fluoride In water; N,N-dimethyl-formamide at 60℃; Suzuki cross-coupling; Inert atmosphere; | 95% |
With [Pd(phthalimidate)2(1,3,5-triaza-7-phosphaadamantane)2]; triethylamine In water at 20 - 80℃; for 6h; Suzuki-Miyaura Coupling; Inert atmosphere; |
4-tert-Butylphenylacetylene
5-Iodo-2'-deoxyuridine
5-((4-tert-butylphenyl)ethynyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In N,N-dimethyl-formamide at 40℃; for 25h; Sonogashira coupling; | 94% |
With copper(l) iodide; tetra-(n-butyl)ammonium iodide; triphenylphosphine; tetrakis(triphenylphosphine) palladium(0); triethylamine In N,N-dimethyl-formamide at 20℃; for 24h; Sonogashira coupling; | 76% |
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In N,N-dimethyl-formamide |
5-Iodo-2'-deoxyuridine
2-(tributylstannyl)furan
5-furan-2-yl-1-(β-D-2-deoxyribofuranos-1-yl)uracil
Conditions | Yield |
---|---|
With bis-triphenylphosphine-palladium(II) chloride In 1,4-dioxane at 90℃; for 2h; Stille coupling; | 94% |
bis-triphenylphosphine-palladium(II) chloride In 1,4-dioxane at 90℃; for 2h; Stille coupling; | 94% |
With bis-triphenylphosphine-palladium(II) chloride In 1,4-dioxane | 94% |
With bis-triphenylphosphine-palladium(II) chloride In 1,4-dioxane at 90℃; Stille Cross Coupling; |
5-Iodo-2'-deoxyuridine
1-Ethynyl-1-cyclohexanol
5-((1-hydroxycyclohexyl)ethynyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In N,N-dimethyl-formamide at 50℃; for 7h; Sonogashira coupling; | 94% |
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In N,N-dimethyl-formamide |
2-Methylphenylboronic acid
5-Iodo-2'-deoxyuridine
5-(2-methylphenyl)-2'-deoxyuridine
Conditions | Yield |
---|---|
With sodium tetrachloropalladate; trisodium tris(3-sulfophenyl)phosphine; potassium hydroxide In water at 100℃; for 24h; Suzuki-Miyaura coupling; Inert atmosphere; | 94% |
With sodium tetrachloropalladate(II); potassium hydroxide In water at 100℃; for 1h; Suzuki-Miyaura Coupling; Inert atmosphere; Microwave irradiation; | 30% |
With sodium tetrachloropalladate(II); potassium hydroxide In water at 100℃; for 24h; Concentration; Time; Suzuki-Miyaura Coupling; Inert atmosphere; Green chemistry; | 22% |
benzofuran-2-boronic acid
5-Iodo-2'-deoxyuridine
5-(benzofuran-2-yl)-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidine-2,4(1H,3H)-dione
Conditions | Yield |
---|---|
With [Pd(succinimidate)2(1,3,5-triaza-7-phosphaadamantane)2]; triethylamine In water at 80℃; for 0.0833333h; Catalytic behavior; Concentration; Suzuki-Miyaura Coupling; Microwave irradiation; Inert atmosphere; | 94% |
With C30H24Cl2N2O10Pd2S2(2-)*2Na(1+); triethylamine In water at 60℃; for 3h; Solvent; Reagent/catalyst; Temperature; Suzuki-Miyaura Coupling; Inert atmosphere; Schlenk technique; | 89% |
5-Iodo-2'-deoxyuridine
propionic acid anhydride
3′,5′-bis-O-propionyl-5-iodo-2′-deoxyuridine
Conditions | Yield |
---|---|
With pyridine at 60℃; for 8h; Inert atmosphere; | 93% |
With pyridine | 85% |
Conditions | Yield |
---|---|
With tetrakis(triphenylphosphine) palladium(0) In tetrahydrofuran for 12h; Inert atmosphere; Reflux; | 92% |
With bis-triphenylphosphine-palladium(II) chloride In tetrahydrofuran for 24h; Inert atmosphere; Reflux; | 50% |
With bis-triphenylphosphine-palladium(II) chloride In tetrahydrofuran for 24h; Heating; | 47% |
5-Iodo-2'-deoxyuridine
trimethylsilylacetylene
1-(2-deoxy-β-D-ribofuranosyl)-5-[2-(trimethylsilyl)ethynyl]uracil
Conditions | Yield |
---|---|
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In N,N-dimethyl-formamide at 55℃; for 24h; Sonogashira coupling; | 92% |
With bis-triphenylphosphine-palladium(II) chloride; copper(l) iodide; triethylamine In acetonitrile at 50℃; for 3.5h; Schlenk technique; Inert atmosphere; | 85% |
With bis-triphenylphosphine-palladium(II) chloride; copper(l) iodide; triethylamine In acetonitrile for 3.5h; Inert atmosphere; Heating; | 82% |
Conditions | Yield |
---|---|
With palladium diacetate; sodium carbonate; tris-(m-sulfonatophenyl)phosphine In water; acetonitrile at 80℃; Suzuki coupling; | 92% |
With tetrakis(triphenylphosphine) palladium(0); cesium fluoride In water; N,N-dimethyl-formamide at 60℃; Suzuki cross-coupling; Inert atmosphere; | 78% |
With palladium diacetate; sodium carbonate; triphenylphosphine In water at 120℃; for 0.166667h; Suzuki-Miyaura Coupling; Inert atmosphere; Sealed tube; Microwave irradiation; | 74% |
With [Pd(phthalimidate)2(1,3,5-triaza-7-phosphaadamantane)2]; triethylamine In water at 20 - 80℃; for 6h; Suzuki-Miyaura Coupling; Inert atmosphere; |
methyl 3-ethynylbenzoate
5-Iodo-2'-deoxyuridine
Conditions | Yield |
---|---|
With copper(l) iodide; triethylamine; tetrakis(triphenylphosphine) palladium(0) In tetrahydrofuran at 55℃; for 12h; | 92% |
The Uridine,2'-deoxy-5-iodo-, with the CAS registry number 54-42-2 and EINECS registry number 200-207-8, has the IUPAC name of 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-iodopyrimidine-2,4-dione. It is a kind of crystalline solid which is sensitive to air and light, and it is always used as antiviral. The molecular formula of the chemical is C9H11IN2O5.
The physical properties of Uridine,2'-deoxy-5-iodo- are as followings: (1)ACD/LogP: -0.59; (2)# of Rule of 5 Violations: 0; (3)ACD/LogD (pH 5.5): -1; (4)ACD/LogD (pH 7.4): -1; (5)ACD/BCF (pH 5.5): 1; (6)ACD/BCF (pH 7.4): 1; (7)ACD/KOC (pH 5.5): 12; (8)ACD/KOC (pH 7.4): 6; (9)#H bond acceptors: 7; (10)#H bond donors: 3; (11)#Freely Rotating Bonds: 4; (12)Polar Surface Area: 99.1 Å2; (13)Index of Refraction: 1.715; (14)Molar Refractivity: 64.752 cm3; (15)Molar Volume: 164.874 cm3; (16)Polarizability: 25.67×10-24cm3; (17)Surface Tension: 87.47 dyne/cm; (18)Density: 2.148 g/cm3.
Preparation: You can start with propiolic alcohol by oxidation and esterification, then it reacts with 2-amino-oxazoline nucleoside. By a series of acylation, bromination, catalytic hydrogenation and hydrolysis, you can get the product.
You should be cautious while dealing with this chemical. It may cause cancer and heritable genetic damage. Therefore, you had better take the following instructions: Do not breathe dust; Avoid exposure - obtain special instruction before use; In case of accident or if you feel unwell, seek medical advice immediately (show label where possible); Wear suitable protective clothing.
You can still convert the following datas into molecular structure:
(1)SMILES: I\C1=C\N(C(=O)NC1=O)C2C[C@H](O)[C@@H](CO)O2
(2)InChI: InChI=1/C9H11IN2O5/c10-4-2-12(9(16)11-8(4)15)7-1-5(14)6(3-13)17-7/h2,5-7,13-14H,1,3H2,(H,11,15,16)/t5-,6+,7?/m0/s1
(3)InChIKey: XQFRJNBWHJMXHO-GFCOJPQKBD
The toxicity data is as follows:
Organism | Test Type | Route | Reported Dose (Normalized Dose) | Effect | Source |
---|---|---|---|---|---|
mouse | LD50 | intraperitoneal | 1gm/kg (1000mg/kg) | JNCI, Journal of the National Cancer Institute. Vol. 62, Pg. 911, 1979. | |
mouse | LD50 | oral | > 10gm/kg (10000mg/kg) | Drugs in Japan Vol. -, Pg. 153, 1995. | |
rat | LD50 | intraperitoneal | 4gm/kg (4000mg/kg) | Advances in Teratology. Vol. 3, Pg. 181, 1968. |
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