Product Name

  • Name

    Daptomycin

  • EINECS 600-389-2
  • CAS No. 103060-53-3
  • Density 1.45 g/cm3
  • Solubility
  • Melting Point 202-204?C
  • Formula C72H101 N17 O26
  • Boiling Point 2078.2 °C at 760 mmHg
  • Molecular Weight 1620.69
  • Flash Point 1210.7 °C
  • Transport Information
  • Appearance White powder
  • Safety
  • Risk Codes
  • Molecular Structure Molecular Structure of 103060-53-3 (Daptomycin)
  • Hazard Symbols
  • Synonyms Benzenebutanoic acid, N-(1-oxodecyl)-L-tryptophyl-D-asparaginyl-L-a-aspartyl-L-threonylglycyl-L-ornithyl-L-a-aspartyl-D-alanyl-L-a-aspartylglycyl-D-seryl-(3R)-3-methyl-L-a-glutamyl-a,2-diamino-g-oxo-, (13?;4)-lactone, (aS)-;Cidecin;Cubicin;Dapcin;Daptomicina;Daptomycine;Daptomycinum;Deptomycin;LY 146032;N-(1-Oxodecyl)-L-tryptophyl-D-asparaginyl-L-a-aspartyl-L-threonylglycyl-L-ornithyl-L-a-aspartyl-D-alanyl-L-a-aspartylglycyl-D-seryl-(3R)-3-methyl-L-a-glutamyl-(aS)-a,2-diamino-g-oxobenzenebutanoicacid (13?;
  • PSA 702.02000
  • LogP 0.88280

Synthetic route

1-decanoic acid
334-48-5

1-decanoic acid

N-(fluoren-9-ylmethoxycarbonyl)glycine
29022-11-5

N-(fluoren-9-ylmethoxycarbonyl)glycine

(2S,3R)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-5-(tert-butoxy)-3-methyl-5-oxopentanoic acid
1429504-34-6

(2S,3R)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-5-(tert-butoxy)-3-methyl-5-oxopentanoic acid

C23H20N4O3

C23H20N4O3

C62H58N4O15

C62H58N4O15

N-(9-fluorenylmethoxycarbonyl)-D-alanine
35661-38-2, 35661-39-3, 79990-15-1

N-(9-fluorenylmethoxycarbonyl)-D-alanine

Fmoc-Thr-OH
73731-37-0

Fmoc-Thr-OH

(R)-N-(fluoren-9-ylmethoxycarbonyl)serine
73724-45-5, 136083-72-2, 116861-26-8

(R)-N-(fluoren-9-ylmethoxycarbonyl)serine

Fmoc-Orn(Boc)-OH
109425-55-0

Fmoc-Orn(Boc)-OH

p-toluenesulfonic acid salt of glycine allyl ester
88223-98-7

p-toluenesulfonic acid salt of glycine allyl ester

(S)-3-(((9H-fluoren-9-yl)methoxy)carbonylamino)-4-(allyloxy)-4-oxobutanoic acid
144120-53-6

(S)-3-(((9H-fluoren-9-yl)methoxy)carbonylamino)-4-(allyloxy)-4-oxobutanoic acid

4-(1,1-dimethylethyl) ester of Nα-[(9H-fluoren-9-ylmethoxy)carbonyl]-L-aspartic acid allyl ester
144120-52-5

4-(1,1-dimethylethyl) ester of Nα-[(9H-fluoren-9-ylmethoxy)carbonyl]-L-aspartic acid allyl ester

(S)-(−)-4-tert-butyl 2-azidosuccinic acid
333366-23-7

(S)-(−)-4-tert-butyl 2-azidosuccinic acid

(S)-2-azido-3-(1-(tert-butoxycarbonyl)-1H-indol-3-yl)propanoic acid

(S)-2-azido-3-(1-(tert-butoxycarbonyl)-1H-indol-3-yl)propanoic acid

daptomycin
103060-53-3

daptomycin

Conditions
ConditionsYield
Stage #1: (S)-3-(((9H-fluoren-9-yl)methoxy)carbonylamino)-4-(allyloxy)-4-oxobutanoic acid With N-ethyl-N,N-diisopropylamine In dichloromethane for 4h; 2-chlorotrityl chloride resin;
Stage #2: With tetrakis(triphenylphosphine) palladium(0); 1,3-dimethylbarbituric acid In dichloromethane; N,N-dimethyl-formamide for 1h; 2-chlorotrityl chloride resin;
Stage #3: 1-decanoic acid; N-(fluoren-9-ylmethoxycarbonyl)glycine; (2S,3R)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-5-(tert-butoxy)-3-methyl-5-oxopentanoic acid; C23H20N4O3; C62H58N4O15; N-(9-fluorenylmethoxycarbonyl)-D-alanine; Fmoc-Thr-OH; (R)-N-(fluoren-9-ylmethoxycarbonyl)serine; Fmoc-Orn(Boc)-OH; p-toluenesulfonic acid salt of glycine allyl ester; 4-(1,1-dimethylethyl) ester of Nα-[(9H-fluoren-9-ylmethoxy)carbonyl]-L-aspartic acid allyl ester; (S)-(−)-4-tert-butyl 2-azidosuccinic acid; (S)-2-azido-3-(1-(tert-butoxycarbonyl)-1H-indol-3-yl)propanoic acid Further stages;
9%

dimethylallyl pyrophosphate

dimethylallyl pyrophosphate

C77H109N17O26

C77H109N17O26

Conditions
ConditionsYield
In aq. buffer at 37℃; for 12h; pH=8;60%
daptomycin
103060-53-3

daptomycin

C82H102N6O16

C82H102N6O16

C153H199N23O42

C153H199N23O42

Conditions
ConditionsYield
Stage #1: C82H102N6O16 With 4-methyl-morpholine; isobutyl chloroformate In tetrahydrofuran at 0℃; for 1h;
Stage #2: daptomycin With sodium hydrogencarbonate In tetrahydrofuran; water at 0 - 20℃;
48%
N-[6-(2,5-dioxo-2,5-dihydro-1H-pyrrol-1-yl)hexanoyl]-L-valyl-N5-carbamoyl-N[4-({[(4-nitrophenoxy)carbonyl]oxy}methyl)phenyl]-L-ornithinamide
159857-81-5

N-[6-(2,5-dioxo-2,5-dihydro-1H-pyrrol-1-yl)hexanoyl]-L-valyl-N5-carbamoyl-N[4-({[(4-nitrophenoxy)carbonyl]oxy}methyl)phenyl]-L-ornithinamide

daptomycin
103060-53-3

daptomycin

MC-vc-PAB-daptomycin

MC-vc-PAB-daptomycin

Conditions
ConditionsYield
With benzotriazol-1-ol; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 20℃; Sealed tube;44%
daptomycin
103060-53-3

daptomycin

C24H25N3O9

C24H25N3O9

C92H121N19O33

C92H121N19O33

Conditions
ConditionsYield
With sodium hydrogencarbonate In tetrahydrofuran; water at 20℃; for 20h;37%
daptomycin
103060-53-3

daptomycin

dimethylallyl pyrophosphate
22679-02-3

dimethylallyl pyrophosphate

C77H109N17O26

C77H109N17O26

Conditions
ConditionsYield
In aq. buffer at 37℃; for 12h; pH=8;6%

Daptomycin History

 Daptomycin (CAS NO.103060-53-3) was originally discovered by researchers at Eli Lilly and Company in the 1980s, who designated the compound LY 146032. It showed promise in Phase I/II clinical trials for the treatment of infections caused by Gram-positive organisms. However, high dose therapy was found to be associated with adverse effects on skeletal muscle, including myalgia and the potential for myositis, and Lilly ceased development. The rights to LY 146032 were subsequently acquired by Cubist Pharmaceuticals in 1997. Food and Drug Administration (FDA) approval in September 2003. Daptomycin is marketed in the EU and several other countries by Novartis following its buying of Chiron Corporation. Outside of the US, Daptomycin is available in Canada and many European countries, with further launches expected in 2008.

Daptomycin Specification

1. Introduction of Daptomycin

Daptomycin is one kind of white crystalline powder, odorless, little bitter taste. If you want to keep it, it should be stored in cool and dry places, keep away from light. Besids, this chemical belongs to the Product Category which include Antibacterial; Intermediates & Fine Chemicals; Pharmaceuticals. In addition, Daptomycin is a naturally-occurring compound found in the soil saprotroph Streptomyces roseosporus.

2. Properties of Daptomycin

Daptomycin has the following property datas: (1)Density: 1.45 g/cm3; (2)Index of Refraction: 1.638; (3)Flash Point: 1210.7 °C; (4)Enthalpy of Vaporization: 366.93 kJ/mol; (5)Boiling Point: 2078.2 °C at 760 mmHg.

3. Structure Descriptors of Daptomycin

You could convert the following datas into the molecular structure:
(1). InChI: InChI=1S/C72H101N17O26/c1-5-6-7-8-9-10-11-22-53(93)81-44(25-38-31-76-42-20-15-13-17-39(38)42)66(108)84-45(27-52(75)92)67(109)86-48(30-59(102)103)68(110)89-61-37(4)115-72(114)49(26-51(91)40-18-12-14-19-41(40)74)87-71(113)60(35(2)24-56(96)97)88-69(111)50(34-90)82-55(95)32-77-63(105)46(28-57(98)99)83-62(104)36(3)79-65(107)47(29-58(100)101)85-64(106)43(21-16-23-73)80-54(94)33-78-70(61)112/h12-15,17-20,31,35-37,43-50,60-61,76,90H,5-11,16,21-30,32-34,73-74H2,1-4H3,(H2,75,92)(H,77,105)(H,78,112)(H,79,107)(H,80,94)(H,81,93)(H,82,95)(H,83,104)(H,84,108)(H,85,106)(H,86,109)(H,87,113)(H,88,111)(H,89,110)(H,96,97)(H,98,99)(H,100,101)(H,102,103)/t35?,36-,37?,43+,44+,45+,46+,47+,48+,49+,50-,60+,61?/m1/s1 
(2). InChIKey: InChIKey=DOAKLVKFURWEDJ-OFNKPWESSA-N
(3). Smiles: C(=O)(N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NC1C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)NCC(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)OC1C)CC(=O)c1ccccc1N)[C@@H](CC(=O)O)C)CO)C)CC(=O)O)CCCN)CC(=O)O)CC(=O)N)Cc1c[nH]c2c1cccc2)CCCCCCCCC

4. Use of Daptomycin

Daptomycin is a novel lipopeptide antibiotic used in the treatment of certain infections caused by Gram-positive organisms. Its distinct mechanism of action means that it may be useful in treating infections caused by multi-resistant bacteria.

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