cordycepin
Conditions | Yield |
---|---|
With ammonia In methanol; ethanol at -20℃; for 48h; | 100% |
Conditions | Yield |
---|---|
With lithium triethylborohydride In tetrahydrofuran; dimethyl sulfoxide 1.) 4 deg C, 1 h, 2.) 19-22 deg C, overnight; | 98% |
With lithium triethylborohydride In dimethyl sulfoxide | 53% |
With lithium triethylborohydride; acetic acid 1.) Me2SO, THF, 1 h ice-water cooling, then -> room temperature, 2.) H2O; Yield given. Multistep reaction; |
9-((2R,3R,5S)-3-((tert-butyldimethylsilyl)oxy)-5-(((tert-butyldimethylsilyl)oxy)methyl)tetrahydrofuran-2-yl)-9H-purin-6-amine
cordycepin
Conditions | Yield |
---|---|
With tetrabutyl ammonium fluoride In tetrahydrofuran at 20℃; | 98% |
cordycepin
Conditions | Yield |
---|---|
With palladium on activated charcoal; hydrogen In methanol at 25℃; under 37503.8 Torr; for 8h; | 95% |
Conditions | Yield |
---|---|
With sodium methylate In methanol for 1h; Heating; | 94% |
((2S,4R,5R)-4-acetoxy-5-(6-amino-9H-purin-9-yl)tetrahydrofuran-2-yl)methyl acetate
cordycepin
Conditions | Yield |
---|---|
With ammonia In methanol for 3h; Ambient temperature; | 93% |
With potassium carbonate In methanol; water at 20℃; for 3h; | 93% |
With methanol; ammonia at 0 - 60℃; for 16h; | 90% |
Stage #1: ((2S,4R,5R)-4-acetoxy-5-(6-amino-9H-purin-9-yl)tetrahydrofuran-2-yl)methyl acetate With sodium hydroxide In methanol at 25℃; for 1h; Stage #2: With ammonium chloride In methanol for 0.5h; Reagent/catalyst; | 87% |
6-N-5'-O-Bis-<4-methoxytriphenylmethyl>-3'-deoxyadenosine
cordycepin
Conditions | Yield |
---|---|
With acetic acid at 20℃; for 12h; | 92% |
(2R,3R,5S)-2-(6-amino-purin-9-yl)-5-(tert-butyl-dimethyl-silanyloxymethyl)tetrahydrofuran-3-ol
cordycepin
Conditions | Yield |
---|---|
With tetrabutyl ammonium fluoride In tetrahydrofuran at 25℃; for 0.5h; | 91% |
9-(3-deoxy-5-O-trityl-β-D-erythro-pentofuranosyl)adenine
cordycepin
Conditions | Yield |
---|---|
With acetic acid In methanol; dichloromethane at 20℃; for 4h; pH=Ca. 4; | 90% |
9-<5-O-(monomethoxytrityl)-3-deoxy-β-D-erythro-pentofuranosyl>adenine
cordycepin
Conditions | Yield |
---|---|
With acetic acid at 20℃; for 2h; | 85% |
9-(3'-Deoxy-3'-iodo-β-D-xylofuranosyl)adenine
cordycepin
Conditions | Yield |
---|---|
With 5% palladium on barium sulphate; hydrogen; triethylamine In methanol under 2280.15 Torr; | 80% |
2',3'-dehydroadenosine
cordycepin
Conditions | Yield |
---|---|
With lithium triethylborohydride In tetrahydrofuran; dimethyl sulfoxide at 4 - 20℃; for 17h; Inert atmosphere; | 77% |
cordycepin
Conditions | Yield |
---|---|
75% |
cordycepin
Conditions | Yield |
---|---|
With formic acid; palladium 10% on activated carbon In methanol at 40℃; for 24h; | 75% |
cordycepin
Conditions | Yield |
---|---|
With 5%-palladium/activated carbon; hydrogen; sodium acetate In ethanol; water at 25℃; under 1551.49 Torr; for 44h; Inert atmosphere; | 52.5% |
Stage #1: 3'-bromo-3'-deoxy-adenosine hydrochloride With sodium acetate In ethanol; water for 1h; Stage #2: With hydrogen In ethanol; water at 20℃; under 760.051 - 1520.1 Torr; for 36h; Reagent/catalyst; Solvent; | 100 g |
A
cordycepin
Conditions | Yield |
---|---|
With sodium methylate In methanol | A 42% B n/a |
2,2-Dimethyl-propionic acid (2S,4R,5R)-4-acetoxy-5-(6-benzoylamino-purin-9-yl)-tetrahydro-furan-2-ylmethyl ester
A
cordycepin
B
N-(9-((2R,3R,5S)-3-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-9H-purin-6-yl)benzamide
Conditions | Yield |
---|---|
With sodium methylate In methanol at 20℃; for 20h; | A 42% B 16% |
2',5'-di-O-acetyl-3'-deoxy-N6-<2-(4-nitrophenyl)ethoxycarbonyl>adenosine
A
cordycepin
Conditions | Yield |
---|---|
With ammonia for 18h; Ambient temperature; | A 25% B 41% |
2',3'-di-O-p-tolylsulphonyl-9-β-D-xylofuranosyladenine
A
3'-deoxydenosine
B
cordycepin
Conditions | Yield |
---|---|
With lithium triethylborohydride In tetrahydrofuran for 16h; Ambient temperature; | A 10% B 36% |
Conditions | Yield |
---|---|
Stage #1: N-acetyl-2',5'-O-diacetyl-3'-iodo-3'-deoxyadenosine With lithium aluminium tetrahydride; 2,2'-azobis(isobutyronitrile) In tetrahydrofuran; toluene for 12h; Reflux; Stage #2: With sodium methylate In methanol at 60℃; for 6h; Reagent/catalyst; Solvent; | A 31.3% B 4.8% |
cordycepin
Conditions | Yield |
---|---|
Stage #1: N-acetyl-2',5'-O-diacetyl-3'-iodo-3'-deoxyadenosine With lithium aluminium tetrahydride; 2,2'-azobis(isobutyronitrile) In tetrahydrofuran; toluene for 4h; Reflux; Stage #2: With sodium methylate In methanol at 60℃; for 6h; Reagent/catalyst; Solvent; | 30.2% |
9-(5-O-acetyl-3-deoxy-β-D-erythro-pentofuranosyl)adenine
cordycepin
Conditions | Yield |
---|---|
With potassium hydroxide In acetone for 1h; | 4 mg |
3'-deoxy-N6-<2-(4-nitrophenyl)ethoxycarbonyl>adenosine
A
cordycepin
Conditions | Yield |
---|---|
With ammonia Ambient temperature; |
Benzoic acid (2S,4R,5R)-4-acetoxy-5-(6-benzoylamino-purin-9-yl)-tetrahydro-furan-2-ylmethyl ester
cordycepin
Conditions | Yield |
---|---|
With MeOT; ammonia Ambient temperature; Yield given; |
2',5'-di-O-acetyl-3'-deoxy-N6-<2-(4-nitrophenyl)ethoxycarbonyl>adenosine
A
2-(4-nitrophenyl)ethanol
B
cordycepin
Conditions | Yield |
---|---|
With ammonia for 18h; Product distribution; Mechanism; Ambient temperature; |
9-(2'-O-Acetyl-3'-bromo-3'-deoxy-β-D-xylofuranosyl)adenine
A
cordycepin
B
2',3'-Dideoxyadenosine
Conditions | Yield |
---|---|
With sodium hydroxide; sodium acetate; palladium on activated charcoal 1.) CH3CN, RT, 6 h; Yield given. Multistep reaction. Yields of byproduct given; |
9-(2-O-acetyl-3-bromo-3-deoxy-5-O-(2,4,4-trimethyl-5-oxo-1,3-dioxolan-2-yl)-β-D-xylofuranosyl)adenine
A
cordycepin
B
2',3'-Dideoxyadenosine
Conditions | Yield |
---|---|
With sodium hydroxide; sodium acetate; palladium on activated charcoal 1.) CH3CN, RT, 3 h; Yield given. Multistep reaction. Yields of byproduct given; |
9-(5-O-acetyl-3-bromo-3-deoxy-β-D-xylofuranosyl)adenine
cordycepin
Conditions | Yield |
---|---|
With sodium hydroxide; sodium carbonate; palladium on activated charcoal 1.) aq. CH3CN, RT, 24 h; Yield given. Multistep reaction; |
Conditions | Yield |
---|---|
With sodium hydroxide; sodium carbonate; palladium on activated charcoal 1.) aq. CH3CN, RT, 2 h; Yield given. Multistep reaction. Yields of byproduct given; |
Conditions | Yield |
---|---|
With sodium hydroxide; sodium acetate; palladium on activated charcoal 1.) CH3CN, RT, 11 h; Yield given. Multistep reaction. Yields of byproduct given; |
cordycepin
acetic anhydride
((2S,4R,5R)-4-acetoxy-5-(6-amino-9H-purin-9-yl)tetrahydrofuran-2-yl)methyl acetate
Conditions | Yield |
---|---|
With pyridine; dmap for 4h; Ambient temperature; | 100% |
With pyridine at 20℃; for 0.5h; | 82% |
Conditions | Yield |
---|---|
With pyridine In N,N-dimethyl-formamide at 0 - 20℃; Inert atmosphere; | 99% |
cordycepin
3’-deoxyinosine
Conditions | Yield |
---|---|
With Azodicarboxamid In water at 50℃; for 1h; Deamination; | 95% |
With water at 37℃; for 1h; Enzymatic reaction; |
cordycepin
tert-butylchlorodiphenylsilane
3'-deoxy-5'-O-[(tertbutyl)diphenylsilyl]adenosine
Conditions | Yield |
---|---|
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; for 4h; Cooling; | 92% |
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; | 90% |
With pyridine at 40℃; for 6h; | 85% |
cordycepin
trityl chloride
9-(3-deoxy-5-O-trityl-β-D-erythro-pentofuranosyl)adenine
Conditions | Yield |
---|---|
With pyridine at 50℃; | 88% |
In pyridine for 120h; Ambient temperature; | 66% |
Conditions | Yield |
---|---|
With pyridine at 0℃; for 2.5h; | 88% |
cordycepin
benzoyl chloride
(2R,3R,5S)-2-[6-(N-benzoylbenzamido)-9H-purin-9-yl]-5-[(benzoyloxy)methyl]oxolan-3-yl benzoate
Conditions | Yield |
---|---|
With pyridine at 80℃; for 4h; | 88% |
In pyridine for 2h; Ambient temperature; | 86% |
With pyridine at 125℃; for 3h; | 47% |
In pyridine | |
With pyridine at 65℃; for 4h; Heating / reflux; |
cordycepin
tert-butyldimethylsilyl chloride
9-((2R,3R,5S)-3-((tert-butyldimethylsilyl)oxy)-5-(((tert-butyldimethylsilyl)oxy)methyl)tetrahydrofuran-2-yl)-9H-purin-6-amine
Conditions | Yield |
---|---|
With 1H-imidazole; dmap In N,N-dimethyl-formamide at 0 - 23℃; for 10h; Inert atmosphere; | 86% |
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; | 41% |
With 1H-imidazole; dmap In N,N-dimethyl-formamide for 0.5h; | |
With 1H-imidazole; dmap In N,N-dimethyl-formamide for 0.5h; | |
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; for 16h; | 1.56 g |
vinyl acetate
cordycepin
9-(5-O-acetyl-3-deoxy-β-D-erythro-pentofuranosyl)adenine
Conditions | Yield |
---|---|
With CAL In tetrahydrofuran at 60℃; for 0.5h; Acetylation; | 85% |
With 1-butyl-3-methylimidazolium Tetrafluoroborate at 50℃; for 6h; Sonication; Enzymatic reaction; regioselective reaction; |
cordycepin
(2R,3R,5S)-2-(6-amino-9H-purin-9-yl)-5-(chloromethyl)tetrahydrofuran-3-ol
Conditions | Yield |
---|---|
With thionyl chloride In N,N,N,N,N,N-hexamethylphosphoric triamide for 6h; | 80% |
With pyridine; thionyl chloride In acetonitrile at 0 - 20℃; for 19h; | 61% |
With 1,3-dimethyl-3,4,5,6-tetrahydro-2(1H)-pyrimidinone; thionyl chloride at 0℃; for 7h; |
Conditions | Yield |
---|---|
With pyridine at 60℃; Inert atmosphere; Reflux; | 75.5% |
cordycepin
mono-4-methoxytrityl chloride
9-<5-O-(monomethoxytrityl)-3-deoxy-β-D-erythro-pentofuranosyl>adenine
Conditions | Yield |
---|---|
With pyridine at 50℃; for 5h; | 74% |
4,4'-dimethoxytrityl chloride
cordycepin
benzoyl chloride
N-(9-((2R,3R,5S)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-3-hydroxytetrahydrofuran-2-yl)-9H-purin-6-yl)benzamide
Conditions | Yield |
---|---|
Stage #1: 4,4'-dimethoxytrityl chloride; cordycepin With pyridine; N-ethyl-N,N-diisopropylamine In 1,4-dioxane at 20℃; for 3h; Stage #2: benzoyl chloride In pyridine | 69% |
Conditions | Yield |
---|---|
Stage #1: cordycepin With sodium hydride In N,N-dimethyl-formamide at 20℃; for 0.5h; Stage #2: 4-methoxy-phenyl-sulphonyl chloride In N,N-dimethyl-formamide | 68.6% |
cordycepin
chlorodimethyl(1,1,2-trimethylpropyl)silane
(2R,3R,5S)-2-(6-Amino-purin-9-yl)-5-[dimethyl-(1,1,2-trimethyl-propyl)-silanyloxymethyl]-tetrahydro-furan-3-ol
Conditions | Yield |
---|---|
With pyridine for 20h; Ambient temperature; | 68% |
cordycepin
n-octanoic acid chloride
3-deoxy-β-D-ribofuranosyl-N6-biotinyladenine
Conditions | Yield |
---|---|
With pyridine at 60℃; Inert atmosphere; Reflux; | 64.3% |
Molecular Structure of Cordycepin (CAS NO.73-03-0):
IUPAC Name: (2R,3R,5S)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolan-3-ol
Empirical Formula: C10H13N5O3
Molecular Weight: 251.2419
H bond acceptors: 8
H bond donors: 4
Freely Rotating Bonds: 4
Polar Surface Area: 74.53Å2
Index of Refraction: 1.863
Molar Refractivity: 59.1 cm3
Molar Volume: 130.8 cm3
Surface Tension: 93.6 dyne/cm
Density: 1.91 g/cm3
Flash Point: 333.1 °C
Enthalpy of Vaporization: 97.57 kJ/mol
Boiling Point: 627.2 °C at 760 mmHg
Vapour Pressure: 1.36E-16 mmHg at 25°C
EINECS: 200-791-4
Melting Point: 225-229 °C
Storage temp: -20 °C
Merck: 13,2555
Product Categories: Miscellaneous Natural Products; Bases & Related Reagents; Intermediates & Fine Chemicals; Nucleotides; PharmaceuticalsIn
ChI
InChI=1/C10H13N5O3/c11-8-7-9(13-3-12-8)15(4-14-7)10-6(17)1-5(2-16)18-10/h3-6,10,16-17H,1-2H2,(H2,11,12,13)/t5-,6+,10+/m0/s1
Smiles
n1(c2c(c(ncn2)N)nc1)[C@@H]1O[C@H](CO)C[C@H]1O
1. | oms-nml:lng 100 µmol/L | CARYAB Caryologia. 28 (1975),301. | ||
2. | dnd-hmn:fbr 500 µmol/L | ENMUDM Environmental Mutagenesis. 7 (1985),267. | ||
3. | dni-hmn:hla 20 mg/L | JANTAJ Journal of Antibiotics. 35 (1982),119. |
EPA Genetic Toxicology Program.
Experimental reproductive effects. Human mutation data reported. When heated to decomposition it emits toxic fumes of NOx.
Safety information of Cordycepin (CAS NO.73-03-0):
Hazard Codes: Xn,T
Risk Statements:
40 Limited evidence of a carcinogenic effect
36/37/38: Irritating to eyes, respiratory system and skin
25 Toxic if swallowed
20/21/22: Harmful by inhalation, in contact with skin and if swallowed
Safety Statements:
22: Do not breathe dust
36: Wear suitable protective clothing
45: In case of accident or if you feel unwell, seek medical advice immediately (show label where possible)
26: In case of contact with eyes, rinse immediately with plenty of water and seek medical advice
RIDADR: UN 2811
WGK Germany: 3
RTECS: AU7358610
F: 10-21
HS Code: 29349990
Cordycepin , with CAS number of 73-03-0, can be called 9H-Purin-6-amine, 9-(3-deoxy-.beta.-D-erythro-pentofuranosyl)- ; 9H-Purine, 6-amino-9-(3-deoxy-.beta.-D-ribofuranosyl)- ; Cordycepin ; 2'-Hydroxy-3'-deoxyadenosine erythro ; 3'-Deoxyadenosine . It is a crystalline solid. Cordycepin (CAS NO.73-03-0) is the first reported in nucleoside antibiotic.
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